getDomainOccurrence()Occurrence
Function: getDomainOccurrence()
Purpose
Calculates mean occurrence at the domain level.
Usage
Output
getDomainOccurrence(FKEYS2024, "tha bifa") %>%
select(YEAR:n) %>%
kableExtra::kable()| YEAR | REGION | SPECIES_CD | occurrence | var | n |
|---|---|---|---|---|---|
| 2024 | FLA KEYS | THA BIFA | 0.9596154 | 6.03e-05 | 622 |
Function: getStratumOccurrence()
Purpose
Calculates mean occurrence at the stratum level.
Usage
getStratumOccurrence()Output
getStratumOccurrence(FKEYS2024, "tha bifa") %>%
select(YEAR:n) %>%
kableExtra::kable()| YEAR | REGION | STRAT | PROT | SPECIES_CD | occurrence | var | n |
|---|---|---|---|---|---|---|---|
| 2024 | FLA KEYS | FK01 | 0 | THA BIFA | 0.4705882 | 0.0155104 | 17 |
| 2024 | FLA KEYS | FK01 | 1 | THA BIFA | 0.6000000 | 0.0260701 | 10 |
| 2024 | FLA KEYS | FK02 | 0 | THA BIFA | 0.9259259 | 0.0006387 | 108 |
| 2024 | FLA KEYS | FK02 | 1 | THA BIFA | 1.0000000 | 0.0000000 | 5 |
| 2024 | FLA KEYS | FK03 | 0 | THA BIFA | 0.9677419 | 0.0010385 | 31 |
| 2024 | FLA KEYS | FK03 | 1 | THA BIFA | 1.0000000 | 0.0000000 | 13 |
| 2024 | FLA KEYS | FK04 | 0 | THA BIFA | 1.0000000 | 0.0000000 | 73 |
| 2024 | FLA KEYS | FK04 | 1 | THA BIFA | 1.0000000 | 0.0000000 | 38 |
| 2024 | FLA KEYS | FK05 | 0 | THA BIFA | 1.0000000 | 0.0000000 | 67 |
| 2024 | FLA KEYS | FK05 | 1 | THA BIFA | 1.0000000 | 0.0000000 | 93 |
| 2024 | FLA KEYS | FK06 | 0 | THA BIFA | 1.0000000 | 0.0000000 | 18 |
| 2024 | FLA KEYS | FK06 | 1 | THA BIFA | 1.0000000 | 0.0000000 | 3 |
| 2024 | FLA KEYS | FK07 | 0 | THA BIFA | 1.0000000 | 0.0000000 | 72 |
| 2024 | FLA KEYS | FK07 | 1 | THA BIFA | 1.0000000 | 0.0000000 | 23 |
| 2024 | FLA KEYS | FK09 | 0 | THA BIFA | 0.9019608 | 0.0017647 | 51 |